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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822331.1_cds_XP_016501066.1_14837
CDS Infomation

[gene=LOC107819478] [db_xref=GeneID:107819478] [protein=protein NSP-INTERACTING KINASE 3-like] [protein_id=XP_016501066.1] [location=join(36311..36413,36601..36733,36828..36899,37028..37171,37272..37343,37447..37506,37785..37882,38023..38169,39141..39482,40078..40469,40689..41006)] [gbkey=CDS]
Sequence

ATGGAGGGAAAGTGGTGTATGCTGTGGTATGTGGGGTTACTGGTTTTAACATTAATGGAG
AGTTCTTATGCTTCTCTTTCCCCTACTGGCATTAATTATGAAGTTGTTGCTTTGACGGAA
ATTAAGAAGGCGTTACATGATCCTTACAATGTTCTGGAGAATTGGGATGTGACTTCTGTG
GACCCTTGCAGTTGGAGAATGGTCACTTGTTCCCTTGATGGCTATGTTTCTGCTCTTGGA
CTACCTAGTCAAAGTCTATCTGGAACATTATCACCTGGAATAGGCAACCTCACTAAATTG
CAATCTGTATTGCTGCAAAACAATGCTATTTCTGGTCCTATTCCTGATGTGATTGGGAAT
TTAGAAAAGCTTCAGACACTTGATCTCTCCAACAACAAATTTGAAGGCGAAATGCCTGCT
TCTTTCGGAGACTTGAGGAATTTAAATTATTTGCGATTAAACAACAATAGCCTCACGGGA
TCCATTCCTCAATCTCTCTCTAACATTGAAGGACTTGCTCTTGTGGATGTTTCTTTTAAT
AATCTTGGTGGCCCACTGCCTAAAATATCATCAAGAGCGTTCAAAGTTGTTGGAAATCCT
TTAATTTGTGGCCAAAGTTCTGGGAACAATTGTTCTGCAGTCTATCCAGAACCGCTATCA
TTCCCGCCAGATAGTTTAGGAGATAAATCAGGAGCAGGAGGTAAAAGCCATCATGTCGCT
GTTGCTTTTGGAGCAAGTTTTGGTGCTGCGTTCTTGGTTATAGTAGTTGTCGCACTGGTT
CTATGGTGGAGCTACCGGCACAATAAACAGATCTTCTTTGATGTCAATGAGCAATATGAT
CCAGAGGTATGCTTGGGTCACCTGAAAAGATATGCCTTTAAGGAACTGCGAACTGCAACT
GATCATTTTAGCTCAAAAAATATTTTGGGGAGCGGAGGATTTGGAGTTGTGTACAAGGGC
CGCTTAAATAATGGAACCGTTGTGGCTGTCAAAAGATTGAAGGACTACAATGCTGTCGGT
GGTGAAATCCAATTTCAGACAGAGGTCGAGTTGATTAGTTTGGCTGTCCATCGAAATCTT
CTCCGTCTTTGGGGTTTTTGCTCGACTGAAAGTGAGCGGCTTCTTGTTTACCCTTATATG
CCAAATGGAAGCGTAGCAGCACGATTAAAAGATCACATCCATGGCAGGCCAGTTTTGCAC
TGGTCAAGGCGGAAAAACATAGCATTAGGTACAGCAAGAGGGCTGGTATATTTGCATGAG
CAGTGTGACCCCAAAATAATCCACCGTGATGTTAAAGCAGCCAACATTCTGTTGGATGAG
GAATTTGAGGCAGTTGTCGGAGACTTTGGGTTGGCAAAGCTCTTGGATCACCGGGATTCC
CATGTAACGACTGCTGTCAGGGGCACCGTTGGCCACATTGCTCCAGAATATTTGTCTACT
GGTCAATCATCAGAGAAAACTGATGTGTTTGGGTTTGGAATCTTACTTCTTGAGCTAATT
ACAGGTCAGAAAGCTGTGGATTTTGGACGAGGGGCCAACCAGAAAGGTGTTATGCTTGAC
TGGGTAAAGAAGCTTCATCAAGAGAAAAAGCTGAACCTTATGGTGGATAAAGATTTAAAG
AACAGCTTTGACCGGATTGAACTTGAAGAGATGGTTCAAGTTGCACTTCTATGTACTCAT
TTCAGTCCTTCTCATCGCCCAAAGATGTCCGAGGTATTAAGGATGCTGGAGGGAGATGGA
TTAGCAGAAAAATGGGAGGCTTCACAAAAAGTCGAAACTCCAAGGTACAGAACTTCTGAA
AATACACCAAAAAGATATTCCGACTATATAGAAGAATCATCACTAGTAGTTGAAGCAATG
GAGCTTTCAGGACCTAGATGA

Peptide Sequence

PEP ID

XP_016501066.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 3-like [Nicotiana tabacum]
Sequence

MEGKWCMLWYVGLLVLTLMESSYASLSPTGINYEVVALTEIKKALHDPYNVLENWDVTSV
DPCSWRMVTCSLDGYVSALGLPSQSLSGTLSPGIGNLTKLQSVLLQNNAISGPIPDVIGN
LEKLQTLDLSNNKFEGEMPASFGDLRNLNYLRLNNNSLTGSIPQSLSNIEGLALVDVSFN
NLGGPLPKISSRAFKVVGNPLICGQSSGNNCSAVYPEPLSFPPDSLGDKSGAGGKSHHVA
VAFGASFGAAFLVIVVVALVLWWSYRHNKQIFFDVNEQYDPEVCLGHLKRYAFKELRTAT
DHFSSKNILGSGGFGVVYKGRLNNGTVVAVKRLKDYNAVGGEIQFQTEVELISLAVHRNL
LRLWGFCSTESERLLVYPYMPNGSVAARLKDHIHGRPVLHWSRRKNIALGTARGLVYLHE
QCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST
GQSSEKTDVFGFGILLLELITGQKAVDFGRGANQKGVMLDWVKKLHQEKKLNLMVDKDLK
NSFDRIELEEMVQVALLCTHFSPSHRPKMSEVLRMLEGDGLAEKWEASQKVETPRYRTSE
NTPKRYSDYIEESSLVVEAMELSGPR

Transcript Sequence

Gene sequence data has not been registered.